rs2208 chr3:72822622 C>T

Sequence
tcccacaccacctcattaaaatac[C/T]gtgctaaaattagggaaactgact
ASB in cell types
A549 (lung carcinoma) adrenal gland
ASB for transcription factors
RAD21_HUMAN SMC3_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN 1.06 0.34 0.010.87 2.02 n/a n/a
SMC3_HUMAN 1.42 0.37 0.030.87 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP autism autism with high iq bipolar disorder
GTEx eQTL Adipose_Subcutaneous Colon_Transverse Esophagus_Mucosa Heart_Atrial_Appendage Heart_Left_Ventricle Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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