rs2209174 chr1:16645453 C>G
- Sequence
gctgtgctaggcccttgcaactga[C/G]ctgtgggacctgaggcctggcccc
- ASB in cell types
- HepG2 (hepatoblastoma) adult erythroblasts GM12878 (female B-cells lymphoblastoid cell line) keratinocytes
- ASB for transcription factors
- CREM_HUMAN RBBP5_HUMAN ZNF48_HUMAN THB_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CREM_HUMAN | 3.69 | -3.69 | 1.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 1.66 | n/a | 2.00 | n/a | n/a | |||
| ZNF48_HUMAN | 3.23 | 1.04 | 1.50 | n/a | n/a | |||
| THB_HUMAN | 3.12 | -2.78 | 1.00 | n/a | No Hit | |||
| RFOX2_HUMAN | 2.27 | -0.26 | 1.83 | n/a | n/a |
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Motif analysis
