rs2209175 chr1:16614029 T>C
- Sequence
gtcactctcaaaaagaataaccaa[T/C]gtgtcaatggcacttgtagttatt
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) HEK293T (embryonic kidney) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZXDB_HUMAN ZN692_HUMAN KLF9_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZXDB_HUMAN | n/a | 3.96 | 2.00 | n/a | n/a | |||
| ZN692_HUMAN | n/a | 4.23 | 2.00 | n/a | n/a | |||
| KLF9_HUMAN | n/a | 3.39 | 2.00 | n/a | No Hit | |||
| ZFX_HUMAN | 0.28 | 2.62 | 2.50 | n/a | No Hit | |||
| ZBT20_HUMAN | n/a | 4.07 | 2.00 | n/a | n/a |
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