rs2227930 chr3:142558733 A>T

Sequence
ataaatccatggaagtgagagcat[A/T]ccacataaatcttccaggatatga
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN n/a 2.08 1.000.05 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI mean corpuscular hemoglobin,  reticulocyte count,  reticulocyte fraction of red cells
GRASP ldl cholesterol,  mean corpuscular volume (mcv),  total cholesterol,  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid

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