rs222906 chr16:15404916 G>C

Sequence
tggcctattcagagggagattgcc[G/C]aagcacagaggagagttcatggca
ASB in cell types
macrophages
ASB for transcription factors
CEBPB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN n/a 1.81 1.000.02 2.50 3.89 Concordant
Items per page:
1 – 1 of 1

Motif analysis

CEBPB_HUMAN Concordant
CEBPB_HUMAN pic

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Tibial Brain_Caudate_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Stomach Testis Thyroid Whole_Blood

Download