rs2230178 chr17:7220187 G>A
- Sequence
ctgcccggcggccctatgccgggg[G/A]tgccgctcaggtaagtcaccgcag
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- ZFX_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -1.32 | 2.50 | 1.00 | n/a | No Hit | |||
| TBP_HUMAN | 0.30 | 1.60 | 1.00 | n/a | No Hit |
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