rs2238101 chr12:6089065 A>G
- Sequence
aaggtcagtgtgaactcccacaca[A/G]aacactctgccaccccgaacggcc
- ASB in cell types
- BEAS-2B (bronchial epithelium) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- GCR_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.05 | 2.05 | 1.36 | 2.35 | Concordant | |||
| ESR1_HUMAN | 0.23 | 1.10 | 1.93 | 2.28 | Concordant |
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Motif analysis
