rs2239533 chr20:45468177 T>C

Sequence
tcactagcctgttatgggctgtgt[T/C]cccacctggctcctgccctcattg
ASB in cell types
22RV1 (prostate carcinoma) breast tumor
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.63 -1.58 1.6·10-31.00 2.00 n/a No Hit
ESR1_HUMAN 2.84 -0.66 5.7·10-31.00 1.75 n/a No Hit
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis triglycerides waist hip ratio
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Brain_Cortex Muscle_Skeletal Thyroid

Download