rs224310 chr10:62851821 C>T

Sequence
ctggtcaacaaggaaagaagtcag[C/T]cagaatgattatttgaccttggac
ASB in cell types
GM18951 (B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.89 0.64 2.6·10-31.00 1.09 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP college completion,  ldl cholesterol,  mitral annular calcium,  triglycerides change with statins
GTEx eQTL Artery_Aorta,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Skin_Sun_Exposed_Lower_leg,  Testis

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