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rs2243630 chr10:7472060 C>G

Sequence
atcctgaaactgtttcaaatatag[C/G]ctggagtatttaatacctttataa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MBD4_HUMAN NCOR2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MBD4_HUMAN 2.30 -0.80 4.8·10-31.00 1.00 n/a n/a
NCOR2_HUMAN 2.63 -4.96 0.021.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes

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