rs2248171 chr10:7457633 A>G

Sequence
tggctgggccacacaatatcccac[A/G]ctgtgtccccatcctttaaatgac
ASB in cell types
MDM(monocyte derived macrophages) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SPI1_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN -0.05 1.75 1.004.2·10-7 1.66 n/a No Hit
IKZF2_HUMAN 1.19 -0.96 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes

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