rs2249240 chr8:103125151 C>T

Sequence
ctttgaatagatgtgcctgctgca[C/T]ttacatctccctgcaaggatagca
ASB in cell types
upper lobe of left lung thyroid gland RH4 (alveolar rhabdomyosarcoma) PC9 (lung adenocarcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.65 0.67 5.0·10-61.00 2.03 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Muscle_Skeletal Pancreas Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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