rs2249255 chr8:103124800 C>T

Sequence
ttttcctagccccttcttggtccc[C/T]actgcaaagttttctatggattac
ASB in cell types
PC9 (lung adenocarcinoma)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.67 -0.23 4.0·10-31.00 2.56 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  fasting insulin,  premature ovarian failure,  stabilized warfarin dose
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Muscle_Skeletal,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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