rs225014 chr14:80203237 T>C
- Sequence
tgccactgttgtcacctccttctg[T/C]actggagacatgcaccacactgga
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.87 | 0.54 | 1.28 | -0.46 | Weak Concordant | |||
| STAG1_HUMAN | 1.26 | 0.88 | 1.03 | n/a | n/a |
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Motif analysis
