rs225215 chr17:32569892 A>G

Sequence
gagtgtgtgaaggtatcacagggc[A/G]agtcactagatggggacagctgct
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MTA2_HUMAN ARNT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MTA2_HUMAN 2.02 -1.73 0.041.00 1.00 n/a n/a
ARNT_HUMAN 2.35 -2.04 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP lung function, predicted ratio of forced expiratory volume in 1 second (fev1) to forced vital capacity (fvc) (fev1/fvc) paternal transmission distortion
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic

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