rs2252718 chr6:45461402 C>A

Sequence
ggaaaacaagaggaaccaaatata[C/A]ggaagacgtagaagggaagggatg
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN n/a 2.84 1.007.5·10-4 1.00 2.21 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP body mass index (bmi) lp-pla2 activity neuroticism
GTEx eQTL Brain_Caudate_basal_ganglia Brain_Hippocampus Brain_Putamen_basal_ganglia Brain_Spinal_cord_cervical_c-1

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