rs225315 chr21:42393356 T>C

Sequence
ttcacatgaagtgaaaggaaatgg[T/C]cccccacctacagtcacaggggta
ASB in cell types
MOLT-4 (Adult T acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
COE1_HUMAN MEF2B_HUMAN CDK9_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COE1_HUMAN 2.74 -2.06 1.4·10-51.00 1.00 n/a No Hit
MEF2B_HUMAN 0.91 n/a 6.0·10-31.00 1.67 n/a No Hit
CDK9_HUMAN -1.55 2.61 1.000.02 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Lung Thyroid Whole_Blood

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