rs2256102 chr3:184134242 C>G

Sequence
gtgcaacgcggggcgggatgggaa[C/G]agtttgcaggaactgcagaagcct
ASB in cell types
adult erythroblasts BEAS-2B (bronchial epithelium)
ASB for transcription factors
HCFC1_HUMAN SUZ12_HUMAN GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
HCFC1_HUMAN 2.34 -0.06 2.4·10-61.00 1.75 n/a n/a
SUZ12_HUMAN -1.66 1.97 1.000.03 1.00 n/a n/a
GCR_HUMAN 0.86 0.10 0.041.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_EBV-transformed_lymphocytes Esophagus_Muscularis Stomach Thyroid

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