rs226005 chr16:21609226 A>G
- Sequence
attgacagaaaccccatggcagcg[A/G]tctctgtggttatccttatgtttc
- ASB in cell types
- MOLM14 (Adult acute myeloid leukemia) CD14+ monocytes MOLT-4 (Adult T acute lymphoblastic leukemia) macrophages
- ASB for transcription factors
- CDK8_HUMAN STAT1_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK8_HUMAN | -1.39 | 2.41 | 1.00 | n/a | n/a | |||
| STAT1_HUMAN | -1.42 | 2.78 | 2.00 | n/a | No Hit | |||
| CDK9_HUMAN | -1.31 | 1.77 | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, advanced age-related macular degeneration, advanced age-related macular degeneration (geographic atrophy), ldl cholesterol, panic disorder, systolic blood pressure (sbp), total cholesterol
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Lung, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood