rs226066 chr1:44354576 G>A
- Sequence
aggtaaactgctaacctggtgtgt[G/A]ggcatgtgttggcgagagggtcaa
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | -2.33 | 2.58 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP hdl cholesterol, hip bone mineral density (bmd), homa-ir, ldl cholesterol, longstanding arthritis, rheumatoid arthritis, triglycerides, years of education
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Pancreas, Pituitary, Testis, Thyroid