rs2267339 chr22:36570195 G>T
- Sequence
gcagggggagggagcgtcggctgc[G/T]gagggagctgggatgcatgcgtgt
- ASB in cell types
- glioblastoma patient-derived cell model pancreas SYO-1(Biphasic synovial sarcoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.26 | 1.36 | 1.49 | -0.72 | Weak Discordant |
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Motif analysis
