rs2273802 chr14:100376562 G>A
- Sequence
actgggcagcgcctaaagcgcccc[G/A]tgccgcttaacgcggtctctcata
- ASB in cell types
- HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- RBM25_HUMAN TYY1_HUMAN CTCF_HUMAN GCR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | 3.50 | n/a | 2.00 | n/a | n/a | |||
| TYY1_HUMAN | 3.03 | -5.36 | 2.00 | n/a | No Hit | |||
| CTCF_HUMAN | 0.24 | 1.01 | 1.24 | 0.29 | Weak Concordant | |||
| GCR_HUMAN | 0.91 | 0.30 | 1.00 | n/a | No Hit |
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Motif analysis
