rs2276077 chr11:123062109 C>T

Sequence
aataacgaaggaagccacaaaaaa[C/T]ccaagagctgcaggcgagttcaat
ASB in cell types
primary B-CLL cells HCT-116 (colon carcinoma) Th1-cells
ASB for transcription factors
BRD4_HUMAN ZFX_HUMAN MAF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BRD4_HUMAN 2.05 0.16 7.5·10-41.00 1.50 n/a n/a
ZFX_HUMAN 1.44 -0.29 2.5·10-31.00 1.25 n/a No Hit
MAF_HUMAN 2.03 -1.31 8.1·10-31.00 2.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  hdl cholesterol change with statins,  ldl cholesterol,  total cholesterol

Download