rs2278108 chr11:57657710 G>T

Sequence
ctccggcaaactacacatcccaaa[G/T]ggcagcgcgcgaccgcgtgtcctt
ASB in cell types
CD14+ monocytes breast tumor MDM(monocyte derived macrophages)
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN TF65_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.96 n/a 8.4·10-51.00 2.00 n/a No Hit
SPI1_HUMAN 1.37 0.40 0.021.00 2.00 n/a No Hit
TF65_HUMAN 1.63 n/a 0.031.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd college completion eye color

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