rs2279696 chr11:10751008 A>G

Sequence
gggaccaagcggctacgccttcca[A/G]gttttcattcggggccgcgccagc
ASB in cell types
HepG2 (hepatoblastoma)
ASB for transcription factors
TYY1_HUMAN RBM25_HUMAN CDK9_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TYY1_HUMAN -0.25 3.42 0.912.2·10-8 1.90 n/a No Hit
RBM25_HUMAN -4.13 1.84 1.006.3·10-3 2.00 n/a n/a
CDK9_HUMAN 1.48 -0.04 0.020.92 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) asthma primary rhegmatogenous retinal detachment
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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