rs2280034 chr2:238529657 C>T

Sequence
cactgactgaagactgtgggcctg[C/T]gtggcaggcaggggaagaaggggg
ASB in cell types
breast tumor
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
breast tumor 2.19 n/a 0.041.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP college completion,  hypertension (early onset hypertension),  infant head circumference,  primary rhegmatogenous retinal detachment
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Nerve_Tibial,  Testis,  Whole_Blood

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