rs2280435 chr19:15551733 C>A
- Sequence
ctcgcacctgtcctgtttgaggga[C/A]cagggtcgaccctgcccccttggg
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- SP2_HUMAN SP3_HUMAN ZN335_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | 1.76 | -4.79 | 2.00 | -1.61 | Weak Concordant | |||
| SP3_HUMAN | 2.44 | n/a | 2.00 | -1.39 | Weak Concordant | |||
| ZN335_HUMAN | 2.98 | -5.49 | 2.00 | n/a | No Hit |
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Motif analysis
