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rs228079 chr21:42546034 A>G

Sequence
ctctatgatgtcaccctgtgttgt[A/G]tgggaatggacttggctgtgggga
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
NFIC_HUMAN MTG16_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFIC_HUMAN -1.95 2.23 1.005.3·10-4 1.00 n/a No Hit
MTG16_HUMAN -0.91 0.91 1.000.03 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum Cells_Cultured_fibroblasts Colon_Sigmoid Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Liver Lung Muscle_Skeletal Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis

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