rs2284094 chr22:42929435 A>G
- Sequence
cttctcattgaagatgctgtcaat[A/G]gcttctgagaactgaaacacagtg
- ASB in cell types
- MDM(monocyte derived macrophages) CD14+ monocytes 22RV1 (prostate carcinoma) macrophages
- ASB for transcription factors
- TF65_HUMAN STAT1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TF65_HUMAN | 2.73 | n/a | 2.00 | n/a | No Hit | |||
| STAT1_HUMAN | 1.19 | -3.78 | 2.00 | 1.75 | Weak Discordant | |||
| ANDR_HUMAN | 2.60 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
