rs2285044 chr3:50299230 T>C
- Sequence
tactgacatgttgatgctggcctc[T/C]gggatgttccgcgtcctagctccg
- ASB in cell types
- HCASMC (Human coronary artery smooth muscle cells) monocytes from periferal blood
- ASB for transcription factors
- TCF21_HUMAN SRBP2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 3.38 | n/a | 2.00 | n/a | n/a | |||
| SRBP2_HUMAN | 1.93 | -0.42 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Breast_Mammary_Tissue, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood