rs2288694 chr15:26971599 C>T
- Sequence
ggcttgcacgcgcggtaagtggcg[C/T]gggggccgcatccccggaggcccc
- ASB in cell types
- LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN EZH2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.04 | -0.29 | 1.19 | -2.04 | Concordant | |||
| EZH2_HUMAN | -1.85 | 2.15 | 1.00 | n/a | n/a |
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Motif analysis
