ADASTRA v5.1.3
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rs2288742
chr16:25106385
T
>
C
Sequence
cagtaccaaaggaacatggagaag[T/C]agctgtctccaaatccaagaggaa
ASB in cell types
GM12890 (Lymphoblastoid Cell Lines)
ASB for transcription factors
CTCF_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
1.28
0.65
0.05
0.87
1.08
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
hip bone mineral density (bmd)
,
ldl cholesterol
,
serum creatinine
,
total cholesterol
GTEx eQTL
Nerve_Tibial
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)