ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs2289193
chr2:11779372
G
>
A
Sequence
gcgcttccctgccccctggtggcc[G/A]gaggagggatttgtcatgaggctc
ASB in cell types
THP-1 (acute monocytic leukemia)
CD14+ monocytes
22RV1 (prostate carcinoma)
neutrophils from periferal blood
ASB for transcription factors
STAT1_HUMAN
ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.16
-1.55
0.01
1.00
2.00
n/a
No Hit
ANDR_HUMAN
2.07
-0.62
0.02
1.00
2.00
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
cystatin c in serum
,
homa-ir
,
obesity with early age of onset (age >2)
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)