rs2289233 chr2:230873554 G>A

Sequence
catctacagatacttcttccttgc[G/A]caggtgaggggccgggccaggtag
ASB in cell types
OCI-LY1 (diffuse large B-cell lymphoma)
ASB for transcription factors
KDM2B_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KDM2B_HUMAN 2.89 -2.78 2.3·10-31.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins,  total cholesterol change with statins
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Minor_Salivary_Gland,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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