rs2289630 chr18:11908655 G>A
- Sequence
tccgcgaagtgcctggcaggctcg[G/A]cagtctgagtgtcgcgttacagag
- ASB in cell types
- CD14+ monocytes BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- STAT1_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 1.66 | -0.60 | 2.00 | n/a | No Hit | |||
| GCR_HUMAN | 1.42 | 0.42 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Liver, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid