rs2295150 chr14:103728824 G>A
- Sequence
ctgtttttactctgtcctctgtgc[G/A]tgcgtctcctactggtactcgtgg
- ASB in cell types
- LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN BRD4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.75 | -1.26 | 1.10 | -1.58 | Weak Concordant | |||
| BRD4_HUMAN | 0.10 | 1.57 | 1.00 | n/a | n/a |
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Motif analysis
