rs2297332 chr6:44387945 G>A

Sequence
tgcgcacgcgcgcggaggtcgggg[G/A]ggcgacgaggagaccctgtggggt
ASB in cell types
HepG2 (hepatoblastoma) BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN THA11_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.43 1.19 1.008.2·10-3 1.00 n/a No Hit
THA11_HUMAN -1.83 2.78 1.000.04 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic,  Testis

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