rs2299035 chr6:7548928 G>A
- Sequence
ttctgtgtgccgaaccttatttat[G/A]ttgttaggttaagtgtttgtagga
- ASB in cell types
- LNCaP (prostate carcinoma) CFPAC-1(pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- FOXA1_HUMAN FOXA2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.07 | 0.96 | 1.96 | 3.79 | Concordant | |||
| FOXA2_HUMAN | -0.98 | 1.34 | 1.58 | 4.25 | Concordant |
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Motif analysis
