rs2300064 chr6:36506364 G>A
- Sequence
aagctaaaaggtcagaatgaggtc[G/A]cccacggaaaatgtcacaatcaaa
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma)
- ASB for transcription factors
- GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.20 | -1.25 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP acute insulin response, acute insulin response to glucose, fasting blood glucose, height, late onset alzheimers disease, primary rhegmatogenous retinal detachment, rheumatoid arthritis, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Liver, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Whole_Blood