rs2303149 chr19:16086611 A>G
- Sequence
tgcatctgctgagatagggaggac[A/G]ccggggccaacgaaaggaagctct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) THP-1 (acute monocytic leukemia) primary endothelial colony-forming cells K562 (myelogenous leukemia)
- ASB for transcription factors
- IKZF2_HUMAN SPI1_HUMAN TAL1_HUMAN TFE2_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | -0.98 | 2.76 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 0.09 | 1.34 | 1.92 | n/a | No Hit | |||
| TAL1_HUMAN | 1.28 | 1.86 | 1.75 | n/a | No Hit | |||
| TFE2_HUMAN | 1.87 | -0.20 | 1.25 | n/a | No Hit |
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