ADASTRA v5.1.3
Search
Browse
Annotate
Help
Downloads
About
rs231189
chr4:2009104
G
>
C
Sequence
gcggtcccacgagcggggcttccc[G/C]ggagagcgcttctgggtggcgacc
ASB in cell types
adrenal gland
foreskin keratinocyte
spleen
thyroid gland
Show more
(+6 others)
ASB for transcription factors
CTCF_HUMAN
JUN_HUMAN
TBP_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
2.72
-0.12
1.4·10
-48
1.00
2.41
n/a
No Hit
JUN_HUMAN
1.76
0.19
5.7·10
-3
0.99
2.00
n/a
No Hit
TBP_HUMAN
-0.05
1.11
1.00
0.02
1.00
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Heart_Atrial_Appendage
,
Muscle_Skeletal
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)