rs231189 chr4:2009104 G>C

Sequence
gcggtcccacgagcggggcttccc[G/C]ggagagcgcttctgggtggcgacc
ASB in cell types
adrenal gland foreskin keratinocyte spleen thyroid gland
ASB for transcription factors
CTCF_HUMAN JUN_HUMAN TBP_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 2.72 -0.12 1.4·10-481.00 2.41 n/a No Hit
JUN_HUMAN 1.76 0.19 5.7·10-30.99 2.00 n/a No Hit
TBP_HUMAN -0.05 1.11 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Tibial Esophagus_Mucosa Heart_Atrial_Appendage Muscle_Skeletal Thyroid

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