ADASTRA v5.1.3
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rs231622
chr5:55232762
G
>
A
Sequence
cgctgtgcagagagcgtcgtacac[G/A]ttacctcgcgtaatgggctcagca
ASB in cell types
HCT-116 (colon carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HCT-116 (colon carcinoma)
1.30
-0.09
0.01
1.00
1.00
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
alzheimers disease
,
body mass index (bmi)
,
fasting insulin
,
homa-b
,
maternal transmission distortion
,
partial epilepsy
,
systolic blood pressure (sbp)
GTEx eQTL
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Cerebellum
,
Brain_Cortex
,
Brain_Frontal_Cortex_BA9
,
Brain_Putamen_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Esophagus_Gastroesophageal_Junction
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Liver
,
Minor_Salivary_Gland
,
Nerve_Tibial
,
Pancreas
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Stomach
,
Testis
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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