rs232232 chr2:88855976 G>A
- Sequence
caggcccccccacttaccagctgc[G/A]tggtcttgacctattacttattcc
- ASB in cell types
- GM19240 (B cells Lymphoblastoid Cell Lines) GM02630 (Fanconi anemi)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM19240 (B cells Lymphoblastoid Cell Lines) | -1.10 | 1.66 | 1.00 | |||
| GM02630 (Fanconi anemi) | 1.99 | -0.56 | 1.33 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Colon_Transverse, Esophagus_Mucosa, Liver, Lung, Nerve_Tibial, Spleen, Stomach, Thyroid, Whole_Blood