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rs232604 chr2:38148819 C>T

Sequence
cagtgccaggagccaggacaatta[C/T]ggggctttccctattgtgtgttct
ASB in cell types
macrophages A549 (lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
macrophages n/a 1.45 1.000.04 2.50
A549 (lung carcinoma) -0.20 0.82 1.000.05 1.29
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) aortic valve calcium parkinsons disease waist hip ratio
GTEx eQTL Cells_Cultured_fibroblasts Muscle_Skeletal Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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