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rs232605 chr2:38148789 G>C

Sequence
ctcctcgccatgagaactaagtca[G/C]tctcccagtgccaggagccaggac
ASB in cell types
macrophages A549 (lung carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
macrophages n/a 2.31 1.001.4·10-3 2.50
A549 (lung carcinoma) -0.08 0.92 1.006.0·10-3 1.19
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration advanced age-related macular degeneration (geographic atrophy) aortic valve calcium parkinsons disease waist hip ratio
GTEx eQTL Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

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