rs2330028 chr22:22201294 A>C
- Sequence
agaccagcagggggcgcggtgaga[A/C]cttctctgtgtatttctgcaggac
- ASB in cell types
- GM12890 (Lymphoblastoid Cell Lines) HeLa (cervical adenocarcinoma) foreskin keratinocyte K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN CDK9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.29 | -0.13 | 1.99 | n/a | No Hit | |||
| CDK9_HUMAN | 2.17 | n/a | 1.00 | n/a | n/a |
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