ADASTRA v5.1.3
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rs2338680
chr15:31487930
G
>
A
Sequence
gaggccaccttgcaggtgggcctg[G/A]ggctcagctctcctgtctcgtccc
ASB in cell types
MS-1 (Small cell lung carcinoma)
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
STAG1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN
-0.46
0.91
1.00
2.7·10
-4
1.07
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
height
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)