rs233924 chr6:131994025 C>G
- Sequence
attcattataatttatttacctaa[C/G]gtaataaacaaaaaaaaattacaa
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -2.15 | 2.42 | 1.00 | 0.52 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Breast_Mammary_Tissue, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg