rs234055 chr3:172593030 G>T
- Sequence
ggggggtccactccagtcactgat[G/T]gatcaccttgcactctctaaagcc
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.67 | 1.01 | 1.00 |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, antidepressant efficacy in major depressive disorder remission after 12 weeks of treatment, hdl cholesterol, intracranial aneurysm (female), transmission distortion, triglycerides