ADASTRA v5.1.3
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rs234117
chr1:184982544
C
>
T
Sequence
tcactctttgagaacagaactttt[C/T]cggctaaatttatttaagggggct
ASB in cell types
LNCaP (prostate carcinoma)
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma)
-0.97
1.52
1.00
7.6·10
-3
1.33
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diabetic retinopathy in type 2 diabetes mellitus
,
fasting insulin
,
homa-b
,
homa-ir
GTEx eQTL
Adipose_Subcutaneous
,
Cells_Cultured_fibroblasts
,
Lung
,
Thyroid
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Generated by ADASTRA database
2022.05.19 v5.1.3 Bill Cipher
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale